Case model 32 swing pins

I have rebuilt the swing cylinders on my Case model 32 backhoe and am now reassembling the stuff. An odd thing has happened, the rod-end pins were not too difficult to remove and one went back together without any problem. The other however was a b**tch to drive in and now after going through the main casting and rod end of the cylinder is now .030 to .060 out of alignment with the lower clamping ear. What is going on??? Did Case assemble this thing with the pin badly mis-aligned and force the whole assembly together?? There does not seem to be any other answer. Has anyone experienced this before? I am thinking of plumbing it up and tweaking the swing back and forth a couple of times to see if it loosens up the fit of the pin enough to get it to drift in place. And no, the pin is not bent. I am open to any ideas on this. Thanks.

Randy